Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEQ13331.12-keto-4-pentenoate hydratase. (264 aa)    
Predicted Functional Partners:
SEQ13364.1
Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family.
       0.639
SER08643.1
2-oxo-3-hexenedioate decarboxylase.
  
  
  0.627
SEQ99484.1
2-oxo-3-hexenedioate decarboxylase.
  
  
  0.607
SEQ10648.1
2,4-dihydroxyhept-2-enedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
 0.569
SEQ62204.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.526
SER22566.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.521
SEQ13261.1
N-methylglutamate dehydrogenase subunit B.
       0.468
SEQ13285.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
       0.468
SEQ13296.1
Sarcosine oxidase subunit gamma; Belongs to the GcvT family.
       0.468
SEQ13246.1
N-methylglutamate dehydrogenase subunit A precursor.
  
    0.460
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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