Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ22166.1 | SEQ22189.1 | SAMN03080615_00766 | SAMN03080615_00767 | Zinc transporter. | L-asparaginase. | 0.510 |
SEQ22166.1 | SEQ22209.1 | SAMN03080615_00766 | SAMN03080615_00768 | Zinc transporter. | Aspartate ammonia-lyase. | 0.510 |
SEQ22166.1 | SEQ38792.1 | SAMN03080615_00766 | SAMN03080615_01325 | Zinc transporter. | Uncharacterized protein, YigZ family. | 0.465 |
SEQ22166.1 | SEQ97896.1 | SAMN03080615_00766 | SAMN03080615_03464 | Zinc transporter. | Hypothetical protein. | 0.420 |
SEQ22189.1 | SEQ22166.1 | SAMN03080615_00767 | SAMN03080615_00766 | L-asparaginase. | Zinc transporter. | 0.510 |
SEQ22189.1 | SEQ22209.1 | SAMN03080615_00767 | SAMN03080615_00768 | L-asparaginase. | Aspartate ammonia-lyase. | 0.945 |
SEQ22209.1 | SEQ22166.1 | SAMN03080615_00768 | SAMN03080615_00766 | Aspartate ammonia-lyase. | Zinc transporter. | 0.510 |
SEQ22209.1 | SEQ22189.1 | SAMN03080615_00768 | SAMN03080615_00767 | Aspartate ammonia-lyase. | L-asparaginase. | 0.945 |
SEQ38792.1 | SEQ22166.1 | SAMN03080615_01325 | SAMN03080615_00766 | Uncharacterized protein, YigZ family. | Zinc transporter. | 0.465 |
SEQ97896.1 | SEQ22166.1 | SAMN03080615_03464 | SAMN03080615_00766 | Hypothetical protein. | Zinc transporter. | 0.420 |