STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ36170.1Phosphonate transport system substrate-binding protein. (248 aa)    
Predicted Functional Partners:
SEQ36186.1
Aerotaxis receptor.
 
  
  0.927
SEQ36206.1
Hypothetical protein.
 
     0.905
SEQ36232.1
Hypothetical protein.
 
     0.880
SEQ98864.1
Signal recognition particle receptor subunit beta, a GTPase.
 
     0.772
SER07173.1
Hook-length control protein FliK.
  
     0.599
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
 
 0.593
SEQ90362.1
Phosphonate transport system ATP-binding protein.
  
 
 0.593
SEQ04445.1
PAS domain S-box-containing protein.
    
 0.591
SER07807.1
PAS domain S-box-containing protein.
    
 0.556
SEQ11057.1
Carbon-phosphorous lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
  
  
 0.554
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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