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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ37348.1Arsenite oxidase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (819 aa)    
Predicted Functional Partners:
SEQ37328.1
Arsenite oxidase small subunit.
 
 
 
 0.989
SEQ70486.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.953
SER11319.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.936
SEQ60661.1
Cytochrome c.
   
 0.905
SEQ75723.1
Cytochrome c.
   
 0.905
SER17329.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.855
SEQ50934.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
    
 0.849
SEQ93780.1
Translation elongation factor TU.
   
 
 0.830
SER13852.1
Translation elongation factor TU.
   
 
 0.830
SER21851.1
Translation elongation factor TU.
   
 
 0.830
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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