Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEQ37628.1NTE family protein. (300 aa)    
Predicted Functional Partners:
SEQ37675.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.683
SEQ37660.1
Protein of unknown function.
       0.669
SEQ43374.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
    
  0.575
SEQ37601.1
Threonine/homoserine efflux transporter RhtA.
       0.482
SEQ73959.1
FAD/FMN-containing dehydrogenase.
    
  0.456
SER15236.1
D-lactate dehydrogenase.
    
  0.456
SEQ68890.1
Competence protein ComEC.
     
 0.455
SEQ88769.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
 
  
  0.453
SEQ62389.1
AMP-binding enzyme.
  
 
 0.446
SEQ76338.1
Phospholipase C.
     
 0.434
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.