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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ41901.1AraC family transcriptional regulator, ethanolamine operon transcriptional activator. (322 aa)    
Predicted Functional Partners:
SEQ70486.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.727
SEQ41923.1
Uncharacterized conserved protein.
 
     0.618
SEQ28825.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.584
SEQ41937.1
Predicted arabinose efflux permease, MFS family.
       0.520
SEQ09707.1
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
   
 0.474
SEQ09686.1
Ethanolamine ammonia-lyase heavy chain.
 
   
 0.459
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.410
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.409
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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