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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ43764.1Sulfur-oxidizing protein SoxZ. (104 aa)    
Predicted Functional Partners:
SEQ43794.1
Thiosulfate-binding protein SoxY.
 
 
 0.998
SER15374.1
Esterase-like activity of phytase.
   
 0.955
SEQ74041.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
   
 0.800
SEQ75740.1
Mo-co oxidoreductase dimerisation domain-containing protein.
 
  
 0.749
cysN
Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.734
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.734
glpE
Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
    
 0.690
SEQ99084.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
     
 0.688
SER05197.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
     
 0.688
SER20128.1
Thiosulfate sulfurtransferase.
    
 0.675
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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