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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ49866.1Nitrate/nitrite transport system permease protein. (327 aa)    
Predicted Functional Partners:
SEQ49896.1
Nitrate/nitrite transport system substrate-binding protein.
 
 0.997
SEQ49851.1
Nitrate/nitrite transport system ATP-binding protein.
 
 0.991
SEQ49726.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.949
SEQ80702.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.917
SEQ80682.1
NitT/TauT family transport system ATP-binding protein.
 
 0.881
SEQ57156.1
NitT/TauT family transport system ATP-binding protein.
 
 0.844
SEQ49789.1
Nitrite reductase (NADH) large subunit.
  
  0.683
SER20273.1
NitT/TauT family transport system ATP-binding protein.
 
 0.659
SEQ49769.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  0.651
SER01633.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.605
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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