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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ51505.1Protein SCO1/2. (258 aa)    
Predicted Functional Partners:
SER11319.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.941
SEQ75111.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.904
SER07054.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
 
 
 0.854
SEQ51484.1
Cytochrome c.
     
 0.790
SEQ51520.1
Hypothetical protein.
       0.773
SEQ09215.1
Small redox-active disulfide protein 2.
  
 
 0.673
SEQ43684.1
Protein SCO1/2.
  
     0.618
SEQ51431.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
   
 0.603
SEQ51449.1
Multicopper oxidase.
 
   
 0.602
SER11358.1
Cytochrome c oxidase assembly protein subunit 11.
  
 
 0.583
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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