Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEQ51505.1Protein SCO1/2. (258 aa)    
Predicted Functional Partners:
SER11319.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.903
SEQ75111.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.812
SEQ51484.1
Cytochrome c.
       0.787
SEQ51520.1
Hypothetical protein.
       0.773
SER11452.1
Cytochrome c oxidase assembly protein subunit 15.
  
 0.698
SER11358.1
Cytochrome c oxidase assembly protein subunit 11.
  
 0.694
SER07054.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
 
 
 0.628
SEQ43684.1
Protein SCO1/2.
  
     0.618
SEQ51431.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
   
 0.600
SEQ51449.1
Multicopper oxidase.
 
   
 0.593
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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