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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ53645.1Sucrose phosphorylase. (583 aa)    
Predicted Functional Partners:
SEQ09947.1
Amino acid exporter, AAE family.
   
 0.997
SEQ53622.1
Glucosyl-3-phosphoglycerate synthase.
   
 0.993
SEQ53599.1
Mannosyl-3-phosphoglycerate phosphatase.
 
     0.951
SER14686.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.857
SER22424.1
Fructokinase.
   
 0.825
SER14757.1
Phosphomannomutase.
 
  
 0.771
SEQ84477.1
Phosphomannomutase / phosphoglucomutase.
    
 0.736
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
  
 
 0.723
SEQ95618.1
Glycosyltransferase, GT2 family.
   
 0.707
SEQ50755.1
Fructan beta-fructosidase.
  
 
 0.673
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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