Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ07238.1 | queF | SAMN03080615_00286 | SAMN03080615_01962 | Hypothetical protein. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.763 |
SEQ57747.1 | SEQ57783.1 | SAMN03080615_01960 | SAMN03080615_01961 | Thioesterase domain-containing protein, putative. | Nitroreductase. | 0.802 |
SEQ57747.1 | SEQ57844.1 | SAMN03080615_01960 | SAMN03080615_01963 | Thioesterase domain-containing protein, putative. | ABC-2 type transport system permease protein. | 0.671 |
SEQ57747.1 | SEQ57870.1 | SAMN03080615_01960 | SAMN03080615_01964 | Thioesterase domain-containing protein, putative. | ABC-2 type transport system ATP-binding protein. | 0.674 |
SEQ57747.1 | queF | SAMN03080615_01960 | SAMN03080615_01962 | Thioesterase domain-containing protein, putative. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.746 |
SEQ57783.1 | SEQ57747.1 | SAMN03080615_01961 | SAMN03080615_01960 | Nitroreductase. | Thioesterase domain-containing protein, putative. | 0.802 |
SEQ57783.1 | SEQ57844.1 | SAMN03080615_01961 | SAMN03080615_01963 | Nitroreductase. | ABC-2 type transport system permease protein. | 0.832 |
SEQ57783.1 | SEQ57870.1 | SAMN03080615_01961 | SAMN03080615_01964 | Nitroreductase. | ABC-2 type transport system ATP-binding protein. | 0.700 |
SEQ57783.1 | queF | SAMN03080615_01961 | SAMN03080615_01962 | Nitroreductase. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.806 |
SEQ57844.1 | SEQ57747.1 | SAMN03080615_01963 | SAMN03080615_01960 | ABC-2 type transport system permease protein. | Thioesterase domain-containing protein, putative. | 0.671 |
SEQ57844.1 | SEQ57783.1 | SAMN03080615_01963 | SAMN03080615_01961 | ABC-2 type transport system permease protein. | Nitroreductase. | 0.832 |
SEQ57844.1 | SEQ57870.1 | SAMN03080615_01963 | SAMN03080615_01964 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.971 |
SEQ57844.1 | queF | SAMN03080615_01963 | SAMN03080615_01962 | ABC-2 type transport system permease protein. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.787 |
SEQ57870.1 | SEQ57747.1 | SAMN03080615_01964 | SAMN03080615_01960 | ABC-2 type transport system ATP-binding protein. | Thioesterase domain-containing protein, putative. | 0.674 |
SEQ57870.1 | SEQ57783.1 | SAMN03080615_01964 | SAMN03080615_01961 | ABC-2 type transport system ATP-binding protein. | Nitroreductase. | 0.700 |
SEQ57870.1 | SEQ57844.1 | SAMN03080615_01964 | SAMN03080615_01963 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.971 |
SEQ57870.1 | queF | SAMN03080615_01964 | SAMN03080615_01962 | ABC-2 type transport system ATP-binding protein. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.787 |
SEQ69341.1 | queF | SAMN03080615_02418 | SAMN03080615_01962 | Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.771 |
SER09955.1 | queC | SAMN03080615_03914 | SAMN03080615_01392 | 6-pyruvoyl tetrahydropterin synthase. | preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.910 |
SER09955.1 | queE | SAMN03080615_03914 | SAMN03080615_01322 | 6-pyruvoyl tetrahydropterin synthase. | 7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. | 0.937 |
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