Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEQ58296.1Polysaccharide pyruvyl transferase. (423 aa)    
Predicted Functional Partners:
SEQ95078.1
Acyl transferase domain-containing protein.
  
 0.726
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
  
 0.720
SEQ58278.1
Sulfotransferase domain-containing protein.
       0.714
SEQ95618.1
Glycosyltransferase, GT2 family.
 
 
 0.696
SEQ58331.1
Hypothetical protein.
  
  
 0.690
SEQ58257.1
UDP-glucose 4-epimerase.
  
 
 0.638
SEQ26997.1
Hypothetical protein.
  
 
 0.616
SER15014.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.524
SEQ95487.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
 
  
 0.488
SEQ95345.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.434
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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