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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ62534.1Glutamine synthetase. (717 aa)    
Predicted Functional Partners:
SEQ28825.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.954
SEQ28854.1
Glutamate synthase (NADPH/NADH) small chain.
    
 0.786
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
  
 
  0.780
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
    
 0.778
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.774
SEQ49769.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
  0.766
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.759
SER19024.1
Gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03.
    
  0.737
SEQ49789.1
Nitrite reductase (NADH) large subunit.
  
 
  0.705
SEQ72805.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 
  0.705
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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