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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ66432.1Hypothetical protein. (406 aa)    
Predicted Functional Partners:
SEQ66466.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
    0.977
SEQ66408.1
Hypothetical protein.
 
    0.971
SEQ66349.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.965
SEQ66378.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
    0.964
SEQ66336.1
Hypothetical protein.
 
     0.865
SEQ66450.1
MoxR-like ATPase.
 
    0.833
SEQ43374.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
     0.695
SEQ52621.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.550
SEQ96398.1
Predicted protein-tyrosine phosphatase.
  
     0.463
SEQ73636.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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