close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ70170.1Pimeloyl-ACP methyl ester carboxylesterase. (287 aa)    
Predicted Functional Partners:
SEQ95078.1
Acyl transferase domain-containing protein.
  
 0.968
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
   
 0.901
SEQ70486.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.751
SEQ68804.1
DNA replication terminus site binding protein.
  
     0.645
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.634
SER05222.1
HD-like signal output (HDOD) domain, no enzymatic activity.
  
     0.616
SEQ70161.1
Para-aminobenzoate synthetase component 1.
    
 0.577
SEQ53868.1
P-loop containing region of AAA domain-containing protein.
  
     0.574
SEQ51981.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.573
SEQ96250.1
Flagellar assembly protein T, N-terminal domain.
  
     0.571
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.