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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ73514.1Drug resistance transporter, EmrB/QacA subfamily. (476 aa)    
Predicted Functional Partners:
SEQ42412.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
  
   
 0.708
SER13227.1
Membrane fusion protein, multidrug efflux system.
 
 0.670
SER03953.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.627
SEQ31492.1
Homoserine dehydrogenase.
    
  0.574
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
  
 
 0.539
SEQ49726.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.498
SEQ85054.1
Chorismate mutase.
   
 
 0.484
SEQ95078.1
Acyl transferase domain-containing protein.
    
 0.459
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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