close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ73748.11,4-dihydroxy-2-naphthoyl-CoA hydrolase. (139 aa)    
Predicted Functional Partners:
SEQ60701.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
  
 0.805
SEQ95078.1
Acyl transferase domain-containing protein.
  
 
 0.678
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
  
 
 0.590
SEQ11968.1
Uncharacterized conserved protein YcbX, contains MOSC and Fe-S domains.
 
 
  0.569
SEQ03888.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
    
 0.550
SER11152.1
acyl-CoA thioester hydrolase.
    
 0.519
SEQ74071.1
acyl-CoA thioesterase.
    
 0.518
SEQ73733.1
Hypothetical protein.
       0.510
SEQ23464.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
  0.487
SEQ03998.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.481
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
Server load: high (92%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.