Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEQ79109.1Pimeloyl-ACP methyl ester carboxylesterase. (278 aa)    
Predicted Functional Partners:
SEQ95078.1
Acyl transferase domain-containing protein.
  
 0.931
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
   
 0.825
SEQ70486.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.809
SEQ79124.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
 
  0.789
SEQ79066.1
Catechol 2,3-dioxygenase.
 
  
  0.687
SEQ79088.1
Amino acid synthesis.
 
     0.687
SEQ79028.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
  
  0.600
SEQ79175.1
4-carboxymuconolactone decarboxylase.
    
 0.593
SEQ79045.1
Sortilin, neurotensin receptor 3.
 
     0.589
SEQ51981.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.569
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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