STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ79499.1Phosphonate transport system substrate-binding protein. (273 aa)    
Predicted Functional Partners:
SEQ79522.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  
  0.855
SEQ79487.1
HD-like signal output (HDOD) domain, no enzymatic activity.
 
     0.833
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.802
SEQ90362.1
Phosphonate transport system ATP-binding protein.
 
 
 0.783
SEQ10959.1
Phosphonate transport system permease protein.
 
 
 0.703
SEQ10934.1
Phosphonate transport system substrate-binding protein.
  
  
  0.688
SEQ79471.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
  0.636
SEQ90350.1
Phosphonate transport system permease protein.
 
 
 0.619
SEQ04445.1
PAS domain S-box-containing protein.
    
 0.591
SEQ81859.1
Response regulator receiver domain-containing protein.
 
  
 0.581
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.