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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ80766.1Thiosulfate/3-mercaptopyruvate sulfurtransferase. (284 aa)    
Predicted Functional Partners:
SEQ76507.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.770
SEQ05500.1
Cation transport regulator ChaC.
     
 0.753
SEQ31492.1
Homoserine dehydrogenase.
     
 0.696
SER20128.1
Thiosulfate sulfurtransferase.
   
 0.653
SEQ88591.1
Selenide, water dikinase.
    
 0.644
SEQ73959.1
FAD/FMN-containing dehydrogenase.
    
 0.641
SER15236.1
D-lactate dehydrogenase.
    
 0.641
SEQ27771.1
CDP-4-dehydro-6-deoxyglucose reductase.
    
 0.591
SEQ39591.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
    
 0.591
SER22160.1
CDP-4-dehydro-6-deoxyglucose reductase.
    
 0.591
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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