STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ84615.1Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. (384 aa)    
Predicted Functional Partners:
SEQ25700.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.970
SEQ84593.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
 
  
 0.863
SEQ53868.1
P-loop containing region of AAA domain-containing protein.
   
   0.854
SEQ84562.1
Hypothetical protein.
   
 0.829
SEQ57373.1
Murein DD-endopeptidase.
 
   
 0.766
gpmI
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.734
SER05376.1
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.728
SEQ01400.1
PAS domain S-box-containing protein.
    
  0.601
SEQ28613.1
Penicillin-binding protein 1A.
  
     0.594
SEQ20556.1
Chemotaxis protein histidine kinase CheA.
    
  0.564
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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