Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ28222.1 | SEQ30102.1 | SAMN03080615_01034 | SAMN03080615_01115 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.788 |
SEQ28222.1 | SEQ31530.1 | SAMN03080615_01034 | SAMN03080615_01177 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Threonine synthase. | 0.572 |
SEQ28222.1 | serC | SAMN03080615_01034 | SAMN03080615_02945 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.980 |
SEQ30102.1 | SEQ28222.1 | SAMN03080615_01115 | SAMN03080615_01034 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.788 |
SEQ30102.1 | SEQ31530.1 | SAMN03080615_01115 | SAMN03080615_01177 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Threonine synthase. | 0.498 |
SEQ30102.1 | serC | SAMN03080615_01115 | SAMN03080615_02945 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.968 |
SEQ31530.1 | SEQ28222.1 | SAMN03080615_01177 | SAMN03080615_01034 | Threonine synthase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.572 |
SEQ31530.1 | SEQ30102.1 | SAMN03080615_01177 | SAMN03080615_01115 | Threonine synthase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.498 |
SEQ31530.1 | SEQ69877.1 | SAMN03080615_01177 | SAMN03080615_02447 | Threonine synthase. | Phosphoserine phosphatase. | 0.832 |
SEQ31530.1 | SEQ85054.1 | SAMN03080615_01177 | SAMN03080615_02944 | Threonine synthase. | Chorismate mutase. | 0.597 |
SEQ31530.1 | SEQ89419.1 | SAMN03080615_01177 | SAMN03080615_03138 | Threonine synthase. | Phosphoserine phosphatase. | 0.498 |
SEQ31530.1 | aroA | SAMN03080615_01177 | SAMN03080615_02942 | Threonine synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.547 |
SEQ31530.1 | pdxA | SAMN03080615_01177 | SAMN03080615_04298 | Threonine synthase. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.807 |
SEQ31530.1 | pdxB | SAMN03080615_01177 | SAMN03080615_01344 | Threonine synthase. | Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.497 |
SEQ31530.1 | serC | SAMN03080615_01177 | SAMN03080615_02945 | Threonine synthase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.890 |
SEQ69877.1 | SEQ31530.1 | SAMN03080615_02447 | SAMN03080615_01177 | Phosphoserine phosphatase. | Threonine synthase. | 0.832 |
SEQ69877.1 | SEQ89419.1 | SAMN03080615_02447 | SAMN03080615_03138 | Phosphoserine phosphatase. | Phosphoserine phosphatase. | 0.905 |
SEQ69877.1 | aroA | SAMN03080615_02447 | SAMN03080615_02942 | Phosphoserine phosphatase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.433 |
SEQ69877.1 | serC | SAMN03080615_02447 | SAMN03080615_02945 | Phosphoserine phosphatase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.932 |
SEQ85054.1 | SEQ31530.1 | SAMN03080615_02944 | SAMN03080615_01177 | Chorismate mutase. | Threonine synthase. | 0.597 |
page 1 of 3