close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ86351.1Putative serine protein kinase, PrkA. (640 aa)    
Predicted Functional Partners:
SEQ86362.1
Hypothetical protein; Belongs to the UPF0229 family.
  
 0.997
SEQ86374.1
Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation.
 
  
 0.992
SEQ86290.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
    0.686
SER02603.1
Aldo/keto reductase.
   
    0.667
SEQ07207.1
PhoH-like ATPase.
   
  
 0.538
SER04117.1
Fructosamine-3-kinase.
   
    0.493
SEQ03105.1
Cell filamentation protein.
   
    0.491
SEQ06693.1
Multimeric flavodoxin WrbA.
   
    0.491
SEQ53505.1
Putative intracellular protease/amidase.
   
    0.491
SEQ67392.1
NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family.
   
    0.491
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.