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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ87001.1Anthranilate 1,2-dioxygenase reductase subunit. (339 aa)    
Predicted Functional Partners:
SEQ39569.1
Dihydroxycyclohexadiene carboxylate dehydrogenase.
 
 0.987
SEQ87038.1
Anthranilate 1,2-dioxygenase.
 
 
 0.972
SEQ87023.1
Anthranilate 1,2-dioxygenase.
 
 
 0.966
SEQ95078.1
Acyl transferase domain-containing protein.
  
 0.961
SEQ50934.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
  
 0.930
SEQ39611.1
Benzoate/toluate 1,2-dioxygenase beta subunit.
 
 
 0.929
SEQ39640.1
Benzoate 1,2-dioxygenase, alpha subunit.
 
 
 0.888
SEQ47440.1
Modular FeS cluster scaffolding protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 0.888
SEQ05500.1
Cation transport regulator ChaC.
   
 0.886
SEQ49726.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.843
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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