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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ90142.1S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (280 aa)    
Predicted Functional Partners:
SEQ90159.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
SEQ31150.1
Aryl-alcohol dehydrogenase.
 0.991
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
    
 0.884
SEQ05826.1
Glutathione-independent formaldehyde dehydrogenase.
  
 
 0.795
SEQ52736.1
Formate dehydrogenase gamma subunit.
    
 0.788
SEQ52692.1
Formate dehydrogenase major subunit.
    
  0.774
SEQ50934.1
NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit.
    
 0.771
SEQ52643.1
Formate dehydrogenase subunit delta.
    
  0.771
SEQ52723.1
Formate dehydrogenase iron-sulfur subunit.
    
  0.764
SEQ95078.1
Acyl transferase domain-containing protein.
  
 0.702
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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