STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthase; Belongs to the prokaryotic GSH synthase family. (320 aa)    
Predicted Functional Partners:
gshA
Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
  
 
 0.926
SEQ38867.1
NADPH-glutathione reductase; Maintains high levels of reduced glutathione.
  
  
 0.877
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.870
SEQ22999.1
Glutaredoxin-family domain-containing protein.
 
  
 0.849
SER19024.1
Gamma-glutamyltransferase 1. Threonine peptidase. MEROPS family T03.
    
 0.841
SEQ92973.1
Glutathione S-transferase.
 
  
 0.824
SEQ40898.1
Aminopeptidase N.
    
 0.820
SEQ76189.1
Glutathione S-transferase.
    
  0.798
SEQ92684.1
Protein TonB.
      0.794
SEQ66168.1
Glutathione S-transferase.
    
 0.791
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.