Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ20085.1 | SEQ96250.1 | SAMN03080615_00661 | SAMN03080615_03420 | Protein of unknown function. | Flagellar assembly protein T, N-terminal domain. | 0.680 |
SEQ20085.1 | SER05222.1 | SAMN03080615_00661 | SAMN03080615_03744 | Protein of unknown function. | HD-like signal output (HDOD) domain, no enzymatic activity. | 0.644 |
SEQ20085.1 | SER19723.1 | SAMN03080615_00661 | SAMN03080615_04304 | Protein of unknown function. | Protein of unknown function. | 0.469 |
SEQ59552.1 | SEQ59598.1 | SAMN03080615_02047 | SAMN03080615_02049 | Tetratricopeptide repeat-containing protein. | OmpA family protein. | 0.636 |
SEQ59552.1 | SEQ96215.1 | SAMN03080615_02047 | SAMN03080615_03418 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.516 |
SEQ59552.1 | SEQ96250.1 | SAMN03080615_02047 | SAMN03080615_03420 | Tetratricopeptide repeat-containing protein. | Flagellar assembly protein T, N-terminal domain. | 0.696 |
SEQ59552.1 | SER05222.1 | SAMN03080615_02047 | SAMN03080615_03744 | Tetratricopeptide repeat-containing protein. | HD-like signal output (HDOD) domain, no enzymatic activity. | 0.767 |
SEQ59552.1 | SER07239.1 | SAMN03080615_02047 | SAMN03080615_03810 | Tetratricopeptide repeat-containing protein. | CheW-like domain-containing protein. | 0.550 |
SEQ59598.1 | SEQ59552.1 | SAMN03080615_02049 | SAMN03080615_02047 | OmpA family protein. | Tetratricopeptide repeat-containing protein. | 0.636 |
SEQ59598.1 | SEQ94781.1 | SAMN03080615_02049 | SAMN03080615_03339 | OmpA family protein. | Tetratricopeptide repeat-containing protein. | 0.503 |
SEQ59598.1 | SEQ96215.1 | SAMN03080615_02049 | SAMN03080615_03418 | OmpA family protein. | Hypothetical protein. | 0.528 |
SEQ59598.1 | SEQ96250.1 | SAMN03080615_02049 | SAMN03080615_03420 | OmpA family protein. | Flagellar assembly protein T, N-terminal domain. | 0.725 |
SEQ59598.1 | SER05222.1 | SAMN03080615_02049 | SAMN03080615_03744 | OmpA family protein. | HD-like signal output (HDOD) domain, no enzymatic activity. | 0.542 |
SEQ59598.1 | SER07215.1 | SAMN03080615_02049 | SAMN03080615_03809 | OmpA family protein. | Protein of unknown function. | 0.710 |
SEQ59598.1 | SER07239.1 | SAMN03080615_02049 | SAMN03080615_03810 | OmpA family protein. | CheW-like domain-containing protein. | 0.676 |
SEQ59598.1 | SER19723.1 | SAMN03080615_02049 | SAMN03080615_04304 | OmpA family protein. | Protein of unknown function. | 0.668 |
SEQ94781.1 | SEQ59598.1 | SAMN03080615_03339 | SAMN03080615_02049 | Tetratricopeptide repeat-containing protein. | OmpA family protein. | 0.503 |
SEQ94781.1 | SEQ96215.1 | SAMN03080615_03339 | SAMN03080615_03418 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.541 |
SEQ94781.1 | SEQ96231.1 | SAMN03080615_03339 | SAMN03080615_03419 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.462 |
SEQ94781.1 | SEQ96250.1 | SAMN03080615_03339 | SAMN03080615_03420 | Tetratricopeptide repeat-containing protein. | Flagellar assembly protein T, N-terminal domain. | 0.691 |
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