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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ99453.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
SEQ99430.1
4-oxalocrotonate tautomerase.
       0.651
SEQ99602.1
Catechol 2,3-dioxygenase.
 
     0.558
SEQ99521.1
Acetaldehyde/propanal dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
       0.513
SEQ99484.1
2-oxo-3-hexenedioate decarboxylase.
       0.509
SEQ99492.1
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
       0.509
SEQ99611.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
     0.504
SEQ62404.1
Iron-containing redox enzyme.
  
     0.477
SER08385.1
Protein of unknown function.
 
     0.461
SEQ99574.1
Aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.456
SEQ99416.1
Putative efflux protein, MATE family.
       0.426
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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