STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER02337.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
SEQ80308.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.747
SEQ93024.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.744
SEQ58821.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.713
SEQ02410.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.682
SEQ07139.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.666
SEQ30147.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.652
SEQ03757.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.651
SER02315.1
Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.617
SEQ10761.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.610
SEQ92989.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.594
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.