Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEQ03718.1 | SEQ28613.1 | SAMN03080615_00121 | SAMN03080615_01050 | Penicillin-binding protein 1C. | Penicillin-binding protein 1A. | 0.842 |
| SEQ03718.1 | SER10409.1 | SAMN03080615_00121 | SAMN03080615_03932 | Penicillin-binding protein 1C. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.813 |
| SEQ03718.1 | mrdA | SAMN03080615_00121 | SAMN03080615_04156 | Penicillin-binding protein 1C. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.416 |
| SEQ28502.1 | SER10409.1 | SAMN03080615_01045 | SAMN03080615_03932 | Sporulation related domain-containing protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.897 |
| SEQ28502.1 | ftsI | SAMN03080615_01045 | SAMN03080615_04207 | Sporulation related domain-containing protein. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.888 |
| SEQ28502.1 | ftsW | SAMN03080615_01045 | SAMN03080615_04212 | Sporulation related domain-containing protein. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.884 |
| SEQ28502.1 | mrdA | SAMN03080615_01045 | SAMN03080615_04156 | Sporulation related domain-containing protein. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.456 |
| SEQ28502.1 | mrdB | SAMN03080615_01045 | SAMN03080615_04157 | Sporulation related domain-containing protein. | Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.469 |
| SEQ28613.1 | SEQ03718.1 | SAMN03080615_01050 | SAMN03080615_00121 | Penicillin-binding protein 1A. | Penicillin-binding protein 1C. | 0.842 |
| SEQ28613.1 | SER10409.1 | SAMN03080615_01050 | SAMN03080615_03932 | Penicillin-binding protein 1A. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.904 |
| SEQ28613.1 | ftsI | SAMN03080615_01050 | SAMN03080615_04207 | Penicillin-binding protein 1A. | Peptidoglycan synthetase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.738 |
| SEQ28613.1 | ftsW | SAMN03080615_01050 | SAMN03080615_04212 | Penicillin-binding protein 1A. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.580 |
| SEQ28613.1 | mrdA | SAMN03080615_01050 | SAMN03080615_04156 | Penicillin-binding protein 1A. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.608 |
| SEQ28613.1 | mrdB | SAMN03080615_01050 | SAMN03080615_04157 | Penicillin-binding protein 1A. | Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.740 |
| SEQ28613.1 | rlpA | SAMN03080615_01050 | SAMN03080615_04159 | Penicillin-binding protein 1A. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.715 |
| SER10383.1 | SER10409.1 | SAMN03080615_03931 | SAMN03080615_03932 | Hypothetical protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.672 |
| SER10383.1 | SER10429.1 | SAMN03080615_03931 | SAMN03080615_03933 | Hypothetical protein. | Tetratricopeptide repeat. | 0.594 |
| SER10409.1 | SEQ03718.1 | SAMN03080615_03932 | SAMN03080615_00121 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1C. | 0.813 |
| SER10409.1 | SEQ28502.1 | SAMN03080615_03932 | SAMN03080615_01045 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Sporulation related domain-containing protein. | 0.897 |
| SER10409.1 | SEQ28613.1 | SAMN03080615_03932 | SAMN03080615_01050 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1A. | 0.904 |
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