Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SER14757.1Phosphomannomutase. (456 aa)    
Predicted Functional Partners:
SER14870.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 0.987
SER14686.1
UTP--glucose-1-phosphate uridylyltransferase.
   
 0.950
pgi-3
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.897
SER14725.1
UDPglucose 6-dehydrogenase.
    
 0.845
SER14739.1
Hypothetical protein.
       0.773
SER14631.1
Capsular exopolysaccharide family.
  
  
 0.759
SEQ95382.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
 
 0.699
SEQ53645.1
Sucrose phosphorylase.
 
  
 0.679
SEQ92751.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.663
SEQ05950.1
Transcriptional regulator, XRE family with cupin sensor.
  
 
 0.652
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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