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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER14981.1Glycosyltransferase involved in cell wall bisynthesis. (403 aa)    
Predicted Functional Partners:
SER14930.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
 
 
 0.863
SER15014.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
  
 0.855
SER14870.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.853
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.835
SER14945.1
Sulfotransferase domain-containing protein.
   
 
 0.811
SER14970.1
Hypothetical protein.
       0.773
SEQ43530.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
 
 0.684
SEQ79804.1
Hypothetical protein.
   
 
 0.684
SER14631.1
Capsular exopolysaccharide family.
 
 
 0.684
SEQ01015.1
4-hydroxy-2-oxovalerate aldolase.
   
 0.678
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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