STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER18594.1Methyl-accepting chemotaxis protein (MCP) signalling domain-containing protein. (372 aa)    
Predicted Functional Partners:
SEQ20556.1
Chemotaxis protein histidine kinase CheA.
 
 0.994
SER08260.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.975
SER07319.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.952
SEQ74880.1
Purine-binding chemotaxis protein CheW.
 
 0.945
SEQ36186.1
Aerotaxis receptor.
 
 
  0.939
SER08247.1
Chemotaxis protein methyltransferase CheR.
 
 0.926
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.923
SEQ04445.1
PAS domain S-box-containing protein.
  
 0.901
SER02541.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.888
SEQ85500.1
PAS domain S-box-containing protein.
 
 0.857
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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