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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER19808.1Hemolysin activation/secretion protein. (596 aa)    
Predicted Functional Partners:
SER19821.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
 
 0.951
SER19799.1
FHA domain protein.
 
     0.758
SER07239.1
CheW-like domain-containing protein.
  
 0.623
SEQ79821.1
Outer membrane autotransporter barrel domain-containing protein.
 
 0.577
SER22312.1
Hypothetical protein.
  
 0.533
SEQ37889.1
SOS cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
   
    0.528
SEQ04445.1
PAS domain S-box-containing protein.
     
 0.487
SEQ46891.1
MafB19-like deaminase.
  
 0.473
SER21075.1
Type VI secretion system protein ImpL.
 
     0.464
SER21044.1
Type VI secretion system protein ImpJ.
 
     0.447
Your Current Organism:
Amphritea atlantica
NCBI taxonomy Id: 355243
Other names: A. atlantica, Amphritea atlantica Gartner et al. 2008 emend. Jang et al. 2015, DSM 18887, LMG 24143, LMG:24143, gamma proteobacterium M41, strain M41
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