STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_020445Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (359 aa)    
Predicted Functional Partners:
APZ42_028346
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
APZ42_017596
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
APZ42_021839
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.989
APZ42_033593
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.984
APZ42_020907
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.984
APZ42_020644
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic.
  
 0.980
APZ42_019723
2-oxoglutarate dehydrogenase E1 component.
  
 0.970
APZ42_025174
Iron-responsive element binding protein 2 variant.
  
 0.968
APZ42_014766
Argininosuccinate lyase.
  
 
 0.947
APZ42_020541
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.941
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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