STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_022453Cell division cycle 5-like protein. (804 aa)    
Predicted Functional Partners:
APZ42_029538
Beta-catenin 1-like protein.
   
 0.999
EOG090X0IT3
Spliceosome-associated protein CWC15.
   
 0.999
EOG090X0489
Pre-mRNA-processing factor 19.
   
 0.999
EOG090X03RP
Pleiotropic regulator 1.
   
 0.999
APZ42_016921
Pre-mRNA-splicing factor SPF27.
   
 0.999
APZ42_026768
Puff-specific protein Bx42.
   
 
 0.996
EOG090X01R1
Crooked neck protein 1.
   
 
 0.996
APZ42_014947
Pre-mRNA-splicing factor SYF1.
   
 
 0.996
EOG090X00RJ
116 kDa U5 small nuclear ribonucleoprotein component protein.
   
 
 0.995
APZ42_026049
Pre-mRNA-processing factor 17.
   
 
 0.995
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.