STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_022795Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix; Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily. (283 aa)    
Predicted Functional Partners:
APZ42_034088
S-adenosylmethionine mitochondrial carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
0.572
APZ42_015079
Uroporphyrinogen-III synthase.
   
  
 0.569
APZ42_014483
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
      
 0.569
APZ42_033870
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
      
 0.543
APZ42_026323
ATP-binding cassette sub-family B member 6, mitochondrial.
      
 0.530
APZ42_014628
ATP-binding cassette sub-family B member 7, mitochondrial.
      
 0.519
APZ42_028232
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
      
 0.516
APZ42_024494
L-allo-threonine aldolase.
    
 
 0.453
APZ42_026039
Oxygen-dependent coproporphyrinogen-III oxidase.
      
 0.416
APZ42_021627
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.414
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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