STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_029459Transcription factor E2F4. (283 aa)    
Predicted Functional Partners:
EOG090X0B66
Transcription factor.
  
 0.998
APZ42_014663
Retinoblastoma family protein.
   
 0.995
APZ42_028172
Putative Transcription factor E2F4.
  
 
0.955
APZ42_022198
Protein lin-37.
    
 0.938
APZ42_025541
Protein lin-9.
    
 0.928
APZ42_031506
Lin-54.
   
 0.918
APZ42_031733
Mothers against decapentaplegic homolog.
    
 0.914
APZ42_014841
Cyclin E-like protein; Belongs to the cyclin family.
    
 0.901
APZ42_023819
G2/mitotic-specific cyclin-A; Belongs to the cyclin family.
    
 0.884
APZ42_010980
Protein lin-52.
    
 0.874
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.