STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_016280Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.891
APZ42_031292
Uncharacterized protein.
    
 0.740
APZ42_033871
Leucine-rich repeat kinase.
    
 0.684
APZ42_034056
Putative Nucleoporin GLE1.
    
  0.620
APZ42_019354
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.614
APZ42_021856
Uncharacterized protein.
    
  0.584
APZ42_024600
Peroxidasin.
    
  0.583
APZ42_028532
Complement C1q tumor necrosis factor-related 7-like protein.
    
  0.564
APZ42_011135
Aladin.
    
  0.555
APZ42_011518
Mitogen-activated protein kinase.
    
  0.541
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.