STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_013664Putative Serine/arginine-rich splicing factor 2. (235 aa)    
Predicted Functional Partners:
APZ42_000020
Serine/arginine-rich splicing factor 1.
  
 0.998
APZ42_016659
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
0.991
APZ42_029281
Transformer-2-like protein.
  
0.991
APZ42_021634
Serine/arginine-rich splicing factor.
  
0.988
APZ42_021683
Putative RNA-binding protein 1.
  
0.988
APZ42_027885
Putative Serine/arginine-rich splicing factor 3.
  
 0.983
APZ42_026161
Pre-mRNA-splicing factor SLU7.
    
 0.980
APZ42_026049
Pre-mRNA-processing factor 17.
     
 0.977
APZ42_022854
Putative ATP-dependent RNA helicase DHX33.
     
 0.976
APZ42_024804
Putative Serine/arginine-rich splicing factor 4.
   
0.968
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.