STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_015990Dual specificity mitogen-activated protein kinase kinase dSOR1; Belongs to the protein kinase superfamily. (431 aa)    
Predicted Functional Partners:
APZ42_026107
Raf serine/threonine-protein kinase phl.
   
0.998
APZ42_031573
Putative E3 ubiquitin-protein ligase RNF182.
   
 0.992
APZ42_012425
Kinase suppressor of Ras 1.
   
 0.991
APZ42_016916
Mitogen-activated protein kinase.
  
0.988
APZ42_030510
Mekk1.
    
0.986
APZ42_011518
Mitogen-activated protein kinase.
    
0.984
EOG090X04KW
Putative MKL/myocardin protein 1.
   
 0.982
APZ42_030484
Raf proto-oncogene serine/threonine-protein kinase.
   
 0.960
APZ42_029208
Signal transducing adapter molecule 1.
    
 0.954
APZ42_018074
Ragulator complex protein LAMTOR3.
    
 0.902
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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