STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_024487Translationally-controlled tumor protein; Belongs to the TCTP family. (217 aa)    
Predicted Functional Partners:
APZ42_011850
Elongation factor 1-gamma; Belongs to the GST superfamily.
   
 
 0.996
APZ42_034294
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
  
 
 0.992
APZ42_019802
Guanine nucleotide-binding protein subunit beta protein.
   
 
 0.986
EOG090X0DNU
60S ribosomal protein L9.
   
 
 0.978
APZ42_027865
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.978
APZ42_029688
40S ribosomal protein S3.
   
   0.975
APZ42_032290
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
   0.975
APZ42_017911
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.972
APZ42_017912
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.972
APZ42_033282
60S ribosomal protein L30.
   
 
 0.971
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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