STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_033358Inhibitor of nuclear factor kappa-B kinase subunit epsilon. (741 aa)    
Predicted Functional Partners:
APZ42_031573
Putative E3 ubiquitin-protein ligase RNF182.
   
 0.998
APZ42_027341
Stimulator of interferon genes protein.
   
 0.992
APZ42_027863
Tonsoku protein.
    
 0.983
APZ42_016304
Tonsoku-like protein.
    
 0.983
APZ42_016797
Putative E3 ubiquitin-protein ligase RNF31.
    
 0.970
APZ42_017604
Sequestosome-1.
    
 0.938
APZ42_012988
E3 ubiquitin-protein ligase mind-bomb.
    
 0.933
APZ42_032342
Putative E3 ubiquitin-protein ligase MIB2.
    
 0.933
APZ42_033871
Leucine-rich repeat kinase.
    
 0.904
APZ42_024062
Cylindromatosis.
    
 0.903
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.