Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APZ42_004973 | APZ42_011545 | A0A0P6ET81 | A0A162SSN7 | Ankyrin repeat domain-containing protein 40. | Protein transport Sec16A-like protein. | 0.928 |
APZ42_004973 | APZ42_013796 | A0A0P6ET81 | A0A162QFE9 | Ankyrin repeat domain-containing protein 40. | Uncharacterized protein. | 0.921 |
APZ42_004973 | APZ42_019750 | A0A0P6ET81 | A0A162CM36 | Ankyrin repeat domain-containing protein 40. | Transport Sec24B,-like protein. | 0.921 |
APZ42_004973 | APZ42_021533 | A0A0P6ET81 | A0A164WKY7 | Ankyrin repeat domain-containing protein 40. | Transport protein Sec24B protein. | 0.921 |
APZ42_004973 | APZ42_023261 | A0A0P6ET81 | A0A164V2T5 | Ankyrin repeat domain-containing protein 40. | Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. | 0.977 |
APZ42_004973 | APZ42_030563 | A0A0P6ET81 | A0A0P5E3T1 | Ankyrin repeat domain-containing protein 40. | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.987 |
APZ42_004973 | APZ42_033286 | A0A0P6ET81 | A0A164L8C2 | Ankyrin repeat domain-containing protein 40. | Protein transport protein Sec24C. | 0.920 |
APZ42_004973 | EOG090X07N7 | A0A0P6ET81 | A0A162DGD4 | Ankyrin repeat domain-containing protein 40. | SEC13 protein; Belongs to the WD repeat SEC13 family. | 0.986 |
APZ42_004973 | EOG090X0HBC | A0A0P6ET81 | A0A162SSQ9 | Ankyrin repeat domain-containing protein 40. | EOG090X0HBC; Belongs to the synaptobrevin family. | 0.820 |
APZ42_011545 | APZ42_004973 | A0A162SSN7 | A0A0P6ET81 | Protein transport Sec16A-like protein. | Ankyrin repeat domain-containing protein 40. | 0.928 |
APZ42_011545 | APZ42_013796 | A0A162SSN7 | A0A162QFE9 | Protein transport Sec16A-like protein. | Uncharacterized protein. | 0.964 |
APZ42_011545 | APZ42_019396 | A0A162SSN7 | A0A0P5ZWL8 | Protein transport Sec16A-like protein. | Transport protein Sec31A. | 0.953 |
APZ42_011545 | APZ42_019750 | A0A162SSN7 | A0A162CM36 | Protein transport Sec16A-like protein. | Transport Sec24B,-like protein. | 0.964 |
APZ42_011545 | APZ42_021533 | A0A162SSN7 | A0A164WKY7 | Protein transport Sec16A-like protein. | Transport protein Sec24B protein. | 0.964 |
APZ42_011545 | APZ42_023261 | A0A162SSN7 | A0A164V2T5 | Protein transport Sec16A-like protein. | Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. | 0.938 |
APZ42_011545 | APZ42_030563 | A0A162SSN7 | A0A0P5E3T1 | Protein transport Sec16A-like protein. | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.993 |
APZ42_011545 | APZ42_033286 | A0A162SSN7 | A0A164L8C2 | Protein transport Sec16A-like protein. | Protein transport protein Sec24C. | 0.990 |
APZ42_011545 | EOG090X07N7 | A0A162SSN7 | A0A162DGD4 | Protein transport Sec16A-like protein. | SEC13 protein; Belongs to the WD repeat SEC13 family. | 0.997 |
APZ42_011545 | EOG090X0HBC | A0A162SSN7 | A0A162SSQ9 | Protein transport Sec16A-like protein. | EOG090X0HBC; Belongs to the synaptobrevin family. | 0.836 |
APZ42_013796 | APZ42_004973 | A0A162QFE9 | A0A0P6ET81 | Uncharacterized protein. | Ankyrin repeat domain-containing protein 40. | 0.921 |
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