STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_014910Alpha-carbonic anhydrase; Belongs to the alpha-carbonic anhydrase family. (284 aa)    
Predicted Functional Partners:
APZ42_020224
Ribosome production factor 2.
   
 
 0.645
APZ42_019782
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.628
EOG090X09YS
60S ribosomal protein L5.
    
 
 0.608
APZ42_020653
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
   0.595
APZ42_025965
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.535
APZ42_020800
Sulfate anion transporter 1.
   
 
 0.505
APZ42_030381
Sulfate transporter.
     
 0.478
APZ42_013133
Sodium-independent sulfate anion transporter.
     
 0.478
APZ42_027046
Chloride anion exchanger.
     
 0.478
APZ42_011194
Sulfate_transp domain-containing protein.
     
 0.478
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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