STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_019009Plasma alpha-L-fucosidase; Belongs to the glycosyl hydrolase 29 family. (499 aa)    
Predicted Functional Partners:
APZ42_032177
Alpha-galactosidase.
     
 0.715
APZ42_032303
Alpha-galactosidase.
     
 0.715
APZ42_026446
Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Required for elimination of toxic metabolites.
    
 0.669
APZ42_012519
Hormone-sensitive lipase.
    
 0.669
APZ42_021001
Uncharacterized protein.
    
  0.633
APZ42_020997
Glyco_hydro_65m domain-containing protein.
    
  0.633
APZ42_023702
Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
    
 0.538
APZ42_019572
Lysosomal alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
 0.529
APZ42_010851
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
    
 0.529
APZ42_016943
Lysosomal alpha-glucosidase protein; Belongs to the glycosyl hydrolase 31 family.
    
 0.529
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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