STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_013701Phosphomevalonate kinase. (190 aa)    
Predicted Functional Partners:
APZ42_021140
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
   
 
 0.956
APZ42_015953
Isopentenyl-diphosphate Delta-isomerase 1.
   
 
 0.822
APZ42_033871
Leucine-rich repeat kinase.
    
 0.782
APZ42_026444
MAM domain-containing glycosylphosphatidylinositol anchor protein 1.
    
 0.759
APZ42_031384
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
   
 0.703
APZ42_019319
SHC-transforming protein 3.
    
 0.689
APZ42_019443
Enhancer of sevenless 2B protein.
    
  0.658
APZ42_030708
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.631
APZ42_018138
Ragulator complex protein LAMTOR2.
   
  0.627
APZ42_023507
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.596
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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