STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_029568Chromaffin granule amine transporter. (499 aa)    
Predicted Functional Partners:
APZ42_030967
Ras-related protein Rab-3A.
     
 0.843
EOG090X04HR
Vesicular inhibitory amino acid transporter.
     
 0.829
APZ42_023544
Vesicular acetylcholine transporter-A.
  
  
 
0.754
APZ42_032515
Synaptotagmin 1 protein, variant 2.
     
 0.740
APZ42_012929
Vesicle-associated membrane protein 8.
   
 
 0.722
APZ42_028167
Regulating synaptic membrane exocytosis 2-like protein.
     
 0.700
EOG090X04X8
Vesicular glutamate transporter 2.
     
 0.686
APZ42_015385
Synapsin.
   
 
 0.683
APZ42_023539
Peroxisomal carnitine O-octanoyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
  
 0.683
APZ42_023165
Syntaxin-binding protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.680
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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