STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_033086Sentrin-specific protease. (677 aa)    
Predicted Functional Partners:
APZ42_029561
Small ubiquitin-related modifier 1.
    
 0.964
APZ42_011039
Ran GTPase-activating protein 1.
    
 
 0.897
APZ42_012130
Importin-5.
    
 
 0.872
APZ42_012129
Importin-5.
    
 
 0.872
APZ42_029428
Putative Sentrin-specific Protease.
    
0.855
APZ42_012908
Aquaporin-11.
    
 0.853
APZ42_020468
NFATC2-interacting protein.
   
 0.829
APZ42_031077
Nuclear pore complex Nup153-like protein.
   
 0.803
APZ42_028585
WD repeat-containing protein 18.
    
 0.764
APZ42_022409
Nuclear pore complex protein Nup133.
   
 
 0.750
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.