STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APZ42_0161013-hydroxyacyl-CoA dehydrogenase type-2. (268 aa)    
Predicted Functional Partners:
APZ42_027308
Bifunctional dihydrofolate reductase-thymidylate synthase.
   
 
 0.806
APZ42_020508
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.762
APZ42_028987
Malonyl-CoA-acyl carrier protein transacylase.
  
 0.762
APZ42_005297
Dehydrogenase/reductase SDR family member 11.
  
 
 0.746
APZ42_022730
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
    
 0.727
APZ42_032739
Sorbitol dehydrogenase.
  
 
 0.716
APZ42_019917
NADH-cytochrome b5 reductase 1.
  
 0.715
APZ42_033871
Leucine-rich repeat kinase.
    
 0.707
APZ42_029080
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
  
 0.683
APZ42_016751
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.682
Your Current Organism:
Daphnia magna
NCBI taxonomy Id: 35525
Other names: D. magna
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